Scalable Graph Algorithms for Bioinformatics using Structure, Parameterization and Dynamic Updates, ERC Consolidator Grant, 9/2025-8/2030 Sequencing technologies have developed to be cheap and ...
An algorithm that can speed up by years the ability to identify from among thousands of possibilities, two or more drugs that work synergistically against a problem like cancer or a viral infection ...
SEA 2024 - 22nd International Symposium on Experimental Algorithms, Leibniz International Proceedings in Informatics (LIPIcs) 301, 14:1--14:19, 2024 Careen Foord, Andrey D. Prjibelski, Wen Hu, Lieke ...
In HIV-1-infected patients with extensive drug resistance, the optimization of background antiretroviral therapy is essential when changing drugs after treatment failure. The genotypic sensitivity ...
The amino acid sequence of the transmembrane protein and its corresponding positions on the cell membrane are transformed into a hidden Markov process. After evaluating the parameters, the Viterbi ...
Bioinformatics Algorithms: an Active Learning Approach is one of the first textbooks to emerge from the recent Massive Open Online Course (MOOC) revolution. A light-hearted and analogy-filled ...
Promoter prediction software can succeed for the ∼50% of genes with CpG islands or for genes with abundant transcript data. Predictions of individual transcription-factor binding sites (TFBSs) are ...
We are living in an era where biology has become synonymous with big data due to the ever-increasing amount of data being generated by technologies such as next-generation sequencing. Bioinformatics ...
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